Groups

Located within the plot_data directory, this holds metadata for each group and samples within the groups:

[
    {
        "group_id": "group_01",
        "uids": [
            "test_01"
        ]
    },
    {
        "group_id": "group_00",
        "uids": [
            "test_00"
        ]
    }
]

Renders as:

The sample ID and group ID must match the underlying directory tree that is built by fqc qc and maintained when using fqc batch-qc and fqc add.

The directory tree of this simple example:

plot_data/
├── group_00
│   └── test_00
│       ├── R1
│       ├── R2
│       └── config.json
├── group_01
│   └── test_01
│       ├── R1
│       ├── R2
│       └── config.json
└── groups.json

For a more detailed example, see the groups.json file located in the example data directory.